• Freely available cloud-based system to study gene expression (qPCR-EcoToxChip to Microarrays to RNAseq) from a range of model and native species of ecological and regulatory interest
• Support for processing raw RNAseq files for a different group of species (galaxy.ecotoxxplorer.ca)
• Tools range from quality controls and normalization to statistical analyses to a range of visual outputs (such as volcano plots, heat maps, and transcriptomic dose-response modelling) as well as the ability to save your work and generate comprehensive study reports
• https://www.ecotoxxplorer.ca/

• MetaboAnalyst is an easy-to-use, comprehensive web server for metabolomics data analysis, visualization and interpretation. It currently receives over 3 million data analysis jobs yearly. Some major milestones include:

I have contributed the Network Explorer module and the API infrastructure to scale up system processing while being at the Xia Lab. Check more details here.

NetworkAnalyst is a powerful web-based visual analytics platform for comprehensive gene expression profiling, meta-analysis and systems interpretation. It currently supports transcriptomics data (gene lists, gene expression tables or raw RNAseq data) for 17 species. The public server receives around 20,000 jobs monthly. Some major milestones include:

• 2019 - NetworkAnalyst (v3.0)

I have contributed project management module for analysis reproducibility and the API infrastructure to scale up system processing while being at the Xia Lab. Check more details here.